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Octave (aka GNU Octave) is an alternative to MATLAB. Originally conceived in 1988 by John W. Eaton as a companion software for an undergraduate textbook, Eaton later opted to modify it into a more flexible tool. Development begun in 1992 and the alpha version was released in 1993. Subsequently, version 1.0 was released a year after that in 1994.
Moodle – Free and open-source learning management system. OLAT – Web-based Learning Content Management System. Omeka – Content management system for online digital collections. openSIS – Web-based Student Information and School Management system. Sakai Project – Web-based learning management system.
For a list of current programs, see List of Mac software. Third-party databases include VersionTracker, MacUpdate and iUseThis. Since a list like this might grow too big and become unmanageable, this list is confined to those programs for which a Wikipedia article exists.
an online tool for visualizing, annotating and managing phylogenetic trees. IcyTree [ 4] Client-side Javascript SVG viewer for annotated rooted trees. Also supports phylogenetic networks. Iroki [ 5] Automatic customization and visualization of phylogenetic trees. iTOL - interactive Tree Of Life [ 6]
GOMA is an open-source, parallel, and scalable multiphysics software package for modeling and simulation of real-life physical processes, with a basis in computational fluid dynamics for problems with evolving geometry. A generic finite element library written in C++ with interfaces for Python, Matlab and Scilab.
Netscape Navigator – free, proprietary. OmniWeb – free, proprietary. Opera – free, proprietary, Chromium-based. Safari (web browser) – built-in from Mac OS X 10.3, available as a separate download for Mac OS X 10.2. SeaMonkey – open source Internet application suite. Shiira – open source.
Successor to Derive. Based on Derive's engine used in TI-89/Voyage 200 and TI-Nspire handheld. Wolfram Alpha. Wolfram Research. 2009. 2013. Pro version: $4.99 / month, Pro version for students: $2.99 / month, ioRegular version: free. Proprietary. Online computer algebra system with step-by step solutions.
RaptorX. remote homology detection, protein 3D modeling, binding site prediction. Automated webserver and Downloadable program. Biskit. wraps external programs into automated workflow. BLAST search, T-Coffee alignment, and MODELLER construction. ESyPred3D. Template detection, alignment, 3D modeling. Automated webserver.